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==复杂系统生物学的主题==

==复杂系统生物学的主题==

[[File:DNA_animation.gif|thumb|center|100px|一个DNA[[双螺旋]]的动画分子模型]]

[[File:DNA_animation.gif|thumb|right|100px|一个DNA[[双螺旋]]的动画分子模型]]

[[File:Telomerase_illustration.jpg|thumb|center|296px|端粒酶的结构与功能]]

[[File:Telomerase_illustration.jpg|thumb|right|296px|端粒酶的结构与功能]]

[[File:MAPKpathway_diagram.svg|thumb|center|140px|一个复杂的信号转导途径]]

[[File:MAPKpathway_diagram.svg|thumb|right|140px|一个复杂的信号转导途径]]

以下只是复杂系统生物学所涵盖的部分主题列表:

以下只是复杂系统生物学所涵盖的部分主题列表:

* 生物与物种的关系与进化 [[Organism]]s and [[species]] relations and evolution

* 生物与物种的关系与进化 Organisms and species relations and evolution

* 物种间的相互作用 [[Intertidal ecology|Interactions among Species]]

* 物种间的相互作用 Intertidal ecology / Interactions among Species

* 进化论和种群遗传学 [[Evolution]] theories and [[population genetics]]

* 进化论和种群遗传学 Evolution theories and population genetics

** 群体遗传学模型 [[Population genetics]] models

** 群体遗传学模型 Population genetics models

** 表观遗传学 [[Epigenetics]]

** 表观遗传学 Epigenetics

** 分子进化理论 [[Molecular evolution]] theories

** 分子进化理论 Molecular evolution theories

* 量子生物计算学 [[Quantum computer|Quantum biocomputation]]

* 量子生物计算学 Quantum computer / Quantum biocomputation

 

* 量子遗传 DNA computing /mQuantum genetics<ref>{{Cite journal | doi = 10.1007/BF02478347 | author = Rosen, R. 1960. | year =  1960| title = A quantum-theoretic approach to genetic problems | url = | journal = Bulletin of Mathematical Biophysics | volume = 22 | issue = 3| pages = 227–255 }}</ref>

* 量子遗传 [[DNA computing|Quantum genetics]]<ref>{{Cite journal | doi = 10.1007/BF02478347 | author = Rosen, R. 1960. | year =  1960| title = A quantum-theoretic approach to genetic problems | url = | journal = Bulletin of Mathematical Biophysics | volume = 22 | issue = 3| pages = 227–255 }}</ref>

 

* 关系生物学 Relational biology<ref name="ReferenceA"/><ref>{{Cite journal | doi = 10.1007/s10516-005-4204-z | author = Baianu, I. C.: 2006 | year =  2006| title = Robert Rosen's Work and Complex Systems Biology | url = | journal = Axiomathes | volume = 16 | issue = 1–2| pages = 25–34 }}</ref><ref>{{Cite journal | doi = 10.1007/BF02477890 | author = Rosen, R.: 1958b | year =  1958| title = The Representation of Biological Systems from the Standpoint of the Theory of Categories | url = | journal = Bulletin of Mathematical Biophysics | volume = 20 | issue = 4| pages = 317–341 }}</ref><ref>[http://planetmath.org/?op=getobj&from=objects&id=10921 PlanetMath<!-- Bot generated title -->]</ref>

* 关系生物学 Relational biology<ref name="ReferenceA"/><ref>{{Cite journal | doi = 10.1007/s10516-005-4204-z | author = Baianu, I. C.: 2006 | year =  2006| title = Robert Rosen's Work and Complex Systems Biology | url = | journal = Axiomathes | volume = 16 | issue = 1–2| pages = 25–34 }}</ref><ref>{{Cite journal | doi = 10.1007/BF02477890 | author = Rosen, R.: 1958b | year =  1958| title = The Representation of Biological Systems from the Standpoint of the Theory of Categories | url = | journal = Bulletin of Mathematical Biophysics | volume = 20 | issue = 4| pages = 317–341 }}</ref><ref>[http://planetmath.org/?op=getobj&from=objects&id=10921 PlanetMath<!-- Bot generated title -->]</ref>

 

* 自我繁殖（在更一般的情况下也称为[[自复制]]） DNA/Self-reproduction<ref>{{cite web|url=http://planetmath.org/?method=l2h&from=objects&name=NaturalTransformationsOfOrganismicStructures&op=getobj|title=PlanetMath |publisher=PlanetMath |date= |accessdate=2010-03-17}}</ref> (also called [[self-replication]] in a more general context)

* 自我繁殖(在更一般的情况下也称为自我复制) [[DNA|Self-reproduction]]<ref>{{cite web|url=http://planetmath.org/?method=l2h&from=objects&name=NaturalTransformationsOfOrganismicStructures&op=getobj|title=PlanetMath |publisher=PlanetMath |date= |accessdate=2010-03-17}}</ref> (also called [[self-replication]] in a more general context)

* 计算基因模型 Computational gene / Computational gene models

 

** DNA拓扑学 DNA topology

* 计算基因模型 [[Computational gene|Computational gene models]]

** DNA测序理论 DNA sequencing theory

** DNA拓扑学 [[DNA topology]]

* 进化发育生物学 Evolutionary developmental biology

** DNA测序理论 [[DNA sequencing theory]]

* 自我生产 Autopoiesis

*进化发育生物学 [[Evolutionary developmental biology]]

* 蛋白质折叠 Protein folding

* 自我生产 [[Autopoiesis]]

* 端粒酶在体内的构象和功能 Telomerase conformations and functions ''in vivo''

* 蛋白质折叠 [[Protein folding]]

* 表观遗传学 Epigenetics

* 端粒酶在体内的构象和功能 [[Telomerase]] conformations and functions ''in vivo''

* 交互组学 Interactomics<ref name="Faith2007">{{cite journal| author = Faith, JJ| year = 2007| title = Large-Scale Mapping and Validation of Escherichia coli Transcriptional Regulation from a Compendium of Expression Profiles| journal = PLOS Biology| volume = 5 | issue = 1 | pages = 54–66| doi = 10.1371/journal.pbio.0050008| pmid = 17214507| pmc = 1764438| display-authors = 1| last2 = Hayete| first2 = Boris| last3 = Thaden| first3 = Joshua T.| last4 = Mogno| first4 = Ilaria| last5 = Wierzbowski| first5 = Jamey| last6 = Cottarel| first6 = Guillaume| last7 = Kasif| first7 = Simon| last8 = Collins| first8 = James J.| last9 = Gardner| first9 = Timothy S.}}</ref><ref name="Hayete2007">{{cite journal|author1=Hayete, B |author2=Gardner, TS |author3=Collins, JJ | year = 2007| title = Size matters: network inference tackles the genome scale| journal = Molecular Systems Biology| volume = 3 |issue = 1| pages = 77| doi = 10.1038/msb4100118| pmid = 17299414| pmc = 1828748}}</ref>

* 表观遗传学 [[Epigenetics]]

* 细胞信号传导 Cell signaling

* 交互组学 [[Interactomics]]<ref name="Faith2007">

* 信号转导网络 Signal transduction / Signal transduction networks

 

* 复杂神经网络 neural net / Complex neural nets]]

{{cite journal| author = Faith, JJ| year = 2007| title = Large-Scale Mapping and Validation of Escherichia coli Transcriptional Regulation from a Compendium of Expression Profiles| journal = [[PLOS Biology]]| volume = 5 | issue = 1 | pages = 54–66| doi = 10.1371/journal.pbio.0050008| pmid = 17214507| pmc = 1764438| display-authors = 1| last2 = Hayete| first2 = Boris| last3 = Thaden| first3 = Joshua T.| last4 = Mogno| first4 = Ilaria| last5 = Wierzbowski| first5 = Jamey| last6 = Cottarel| first6 = Guillaume| last7 = Kasif| first7 = Simon| last8 = Collins| first8 = James J.| last9 = Gardner| first9 = Timothy S.}}</ref><ref name="Hayete2007">{{cite journal|author1=Hayete, B |author2=Gardner, TS |author3=Collins, JJ | year = 2007| title = Size matters: network inference tackles the genome scale| journal = Molecular Systems Biology| volume = 3 |issue = 1| pages = 77| doi = 10.1038/msb4100118| pmid = 17299414| pmc = 1828748}}</ref>

* 基因网络 Gene network / Genetic networks

 

* 形态发生 Morphogenesis

* 细胞信号传导 [[Cell signaling]]

* 数字形态发生 Digital morphogenesis

 

* 复杂自适应系统 Complex adaptive system

* 信号转导网络 [[Signal transduction|Signal transduction networks]]

* 形态形成的拓扑模型 Catastrophe theory / Topological models of morphogenesis

 

* 渔业种群动态 Population dynamics of fisheries

* 复杂神经网络 [[neural net|Complex neural nets]]

* 流行病学 Epidemiology

 

* 理论生态学 Theoretical ecology

* 基因网络 [[Gene network|Genetic networks]]

 

* 形态发生 [[Morphogenesis]]

 

* 数字形态发生 [[Digital morphogenesis]]

 

* 复杂自适应系统 [[Complex adaptive system]]

 

* 形态形成的拓扑模型 [[Catastrophe theory|Topological models of morphogenesis]]

 

* 渔业种群动态 [[Population dynamics of fisheries]]

 

* 流行病学 [[Epidemiology]]

 

* 理论生态学 [[Theoretical ecology]]

 

* 免疫系统 Immune system

* 免疫系统 Immune system